Lineage for d6hvtc_ (6hvt C:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2548740Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2548741Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2548925Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2549037Protein Proteasome alpha subunit (non-catalytic) [56255] (9 species)
    contains an extension to the common fold at the N-terminus
  7. 2549053Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56257] (235 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 3063535Domain d6hvtc_: 6hvt C: [363597]
    Other proteins in same PDB: d6hvtb_, d6hvth_, d6hvti_, d6hvtj_, d6hvtk_, d6hvtl_, d6hvtm_, d6hvtn_, d6hvtv_, d6hvtw_, d6hvtx_, d6hvty_, d6hvtz_
    automated match to d4cr2d_
    complexed with cl, gt5, mg

Details for d6hvtc_

PDB Entry: 6hvt (more details), 2.9 Å

PDB Description: yeast 20s proteasome with human beta2i (1-53) in complex with 20
PDB Compounds: (C:) Proteasome subunit alpha type-4

SCOPe Domain Sequences for d6hvtc_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6hvtc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
gydralsifspdghifqveyaleavkrgtcavgvkgkncvvlgcerrstlklqdtritps
kvskidshvvlsfsglnadsriliekarveaqshrltledpvtveyltryvagvqqrytq
sggvrpfgvstliagfdprddepklyqtepsgiysswsaqtigrnsktvrefleknydrk
eppatveecvkltvrsllevvqtgaknieitvvkpdsdivalsseeinqyvtqieqekqe

SCOPe Domain Coordinates for d6hvtc_:

Click to download the PDB-style file with coordinates for d6hvtc_.
(The format of our PDB-style files is described here.)

Timeline for d6hvtc_:

  • d6hvtc_ appears in periodic updates to SCOPe 2.07 starting on 2019-02-07