Lineage for d6d2pl1 (6d2p L:3-110)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2355236Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2355237Protein automated matches [190740] (25 species)
    not a true protein
  7. 2355363Species Human (Homo sapiens) [TaxId:9606] [187920] (1170 PDB entries)
  8. 3062049Domain d6d2pl1: 6d2p L:3-110 [362111]
    Other proteins in same PDB: d6d2pl2
    automated match to d1aqkl1
    complexed with gol

Details for d6d2pl1

PDB Entry: 6d2p (more details), 2.6 Å

PDB Description: crystal structure of ioma-class clk31 fab from an hiv-1 naive donor in complex with a germline-targeting gp120 engineered outer domain eod- gt8 at 2.6 a
PDB Compounds: (L:) IOMAclass naive CLK31 Fab light chain

SCOPe Domain Sequences for d6d2pl1:

Sequence, based on SEQRES records: (download)

>d6d2pl1 b.1.1.0 (L:3-110) automated matches {Human (Homo sapiens) [TaxId: 9606]}

Sequence, based on observed residues (ATOM records): (download)

>d6d2pl1 b.1.1.0 (L:3-110) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d6d2pl1:

Click to download the PDB-style file with coordinates for d6d2pl1.
(The format of our PDB-style files is described here.)

Timeline for d6d2pl1:

  • d6d2pl1 appears in periodic updates to SCOPe 2.07 starting on 2019-01-17