Lineage for d6csga_ (6csg A:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410108Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2410774Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2410775Protein automated matches [190988] (15 species)
    not a true protein
  7. 2410801Species Enterovirus d68 [TaxId:42789] [269068] (8 PDB entries)
  8. 3061297Domain d6csga_: 6csg A: [361359]
    automated match to d4wm8a_

Details for d6csga_

PDB Entry: 6csg (more details), 2.17 Å

PDB Description: cryoem structure of human enterovirus d68 full native virion
PDB Compounds: (A:) viral protein 1

SCOPe Domain Sequences for d6csga_:

Sequence, based on SEQRES records: (download)

>d6csga_ b.121.4.0 (A:) automated matches {Enterovirus d68 [TaxId: 42789]}
iesiiktatdtvkseinaelgvvpslnavetgatsntepeeaiqtrtvinqhgvsetlve
nflsraalvskrsfeykdhtsstaradknffkwtintrsfvqlrrklelftylrfdaeit
ilttvavngsgnntyvglpdltlqamfvptgaltpekqdsfhwqsgsnasvffkisdppa
ritipfmcinsaysvfydgfagfeknglyginpadtignlcvrivnehqpvgftvtvrvy
mkpkhikawaprpprtlpymsiananykgkerapnalsaiignrdsvktmphnivn

Sequence, based on observed residues (ATOM records): (download)

>d6csga_ b.121.4.0 (A:) automated matches {Enterovirus d68 [TaxId: 42789]}
iesiiktatdtvkseinaelgvvpslnavetgatsntepeeaiqtrtvinqhgvsetlve
nflsraalvskrsfeykdhtsstadknffkwtintrsfvqlrrklelftylrfdaeitil
ttvavngyvglpdltlqamfvptgaltpekqdsfhwqsgsnasvffkisdpparitipfm
cinsaysvfydgfagfeknglyginpadtignlcvrivnehqpvgftvtvrvymkpkhik
awaprpprtlpymsiananykgkerapnalsaiignrdsvktmphnivn

SCOPe Domain Coordinates for d6csga_:

Click to download the PDB-style file with coordinates for d6csga_.
(The format of our PDB-style files is described here.)

Timeline for d6csga_:

  • d6csga_ appears in periodic updates to SCOPe 2.07 starting on 2018-12-20

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d6csgb_