Lineage for Species: Ruminococcus gnavus [TaxId: 33038]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2359630Superfamily b.1.4: beta-Galactosidase/glucuronidase domain [49303] (2 families) (S)
  5. 2360089Family b.1.4.0: automated matches [254272] (1 protein)
    not a true family
  6. 2360090Protein automated matches [254633] (12 species)
    not a true protein
  7. 3061185Species Ruminococcus gnavus [TaxId:33038] [361247] (2 PDB entries)

PDB entries in Species: Ruminococcus gnavus [TaxId: 33038]:

  1. Domain(s) for 5z18:
    1. 3061186Domain d5z18e2: 5z18 E:186-278 [361248]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    2. 3061213Domain d5z18d2: 5z18 D:186-278 [361275]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    3. 3061225Domain d5z18a2: 5z18 A:186-278 [361287]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    4. 3061256Domain d5z18c2: 5z18 C:186-278 [361318]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    5. 3061261Domain d5z18b2: 5z18 B:186-278 [361323]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    6. 3061269Domain d5z18f2: 5z18 F:186-278 [361331]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
  2. Domain(s) for 6ec6:
    1. 3064735Domain d6ec6b2: 6ec6 B:186-278 [364797]
      Other proteins in same PDB: d6ec6a1, d6ec6a3, d6ec6b1, d6ec6b3
      automated match to d5c71a2
      complexed with cl, gol
    2. 3064833Domain d6ec6a2: 6ec6 A:186-278 [364895]
      Other proteins in same PDB: d6ec6a1, d6ec6a3, d6ec6b1, d6ec6b3
      automated match to d5c71a2
      complexed with cl, gol

More info for Species Ruminococcus gnavus [TaxId:33038] from b.1.4.0 automated matches

Timeline for Species Ruminococcus gnavus [TaxId:33038] from b.1.4.0 automated matches:

  • Species Ruminococcus gnavus [TaxId:33038] from b.1.4.0 automated matches appears in periodic updates to SCOPe 2.07 starting on 2018-12-13