Lineage for d5ogra_ (5ogr A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2497139Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2497140Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2498051Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 2498052Protein automated matches [190230] (21 species)
    not a true protein
  7. 2498053Species Blood fluke (Schistosoma mansoni) [TaxId:6183] [189710] (6 PDB entries)
  8. 3060446Domain d5ogra_: 5ogr A: [360508]
    automated match to d3s3qa_
    complexed with act, vs4

Details for d5ogra_

PDB Entry: 5ogr (more details), 1.55 Å

PDB Description: structure of cathepsin b1 from schistosoma mansoni in complex with wrr286 inhibitor
PDB Compounds: (A:) Cathepsin B-like peptidase (C01 family)

SCOPe Domain Sequences for d5ogra_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ogra_ d.3.1.0 (A:) automated matches {Blood fluke (Schistosoma mansoni) [TaxId: 6183]}
veipssfdsrkkwprcksiatirdqsrcgscwafgaveamsdrsciqsggkqnvelsavd
llsccescglgceggilgpawdywvkegivtgsskenhagcepypfpkcehhtkgkyppc
gskiyktprckqtcqkkyktpytqdkhrgkssynvkndekaiqkeimkygpveagftvye
dflnyksgiykhitgetlgghairiigwgvenkapywlianswnedwgengyfrivrgrd
ecsiesevtagrin

SCOPe Domain Coordinates for d5ogra_:

Click to download the PDB-style file with coordinates for d5ogra_.
(The format of our PDB-style files is described here.)

Timeline for d5ogra_:

  • d5ogra_ appears in periodic updates to SCOPe 2.07 starting on 2018-11-22