Lineage for d5uxya_ (5uxy A:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2492802Fold c.119: DAK1/DegV-like [82548] (1 superfamily)
    2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest]
  4. 2492803Superfamily c.119.1: DAK1/DegV-like [82549] (3 families) (S)
    domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different
  5. 2492850Family c.119.1.0: automated matches [191443] (1 protein)
    not a true family
  6. 2492851Protein automated matches [190655] (11 species)
    not a true protein
  7. 2492854Species Eubacterium eligens [TaxId:39485] [188765] (2 PDB entries)
  8. 3060428Domain d5uxya_: 5uxy A: [360490]
    automated match to d3fdja_
    complexed with acy, na, x90

Details for d5uxya_

PDB Entry: 5uxy (more details), 1.8 Å

PDB Description: the crystal structure of a degv family protein from eubacterium eligens loaded with heptadecanoic acid to 1.80 angstrom resolution (alternative refinement of pdb 3fdj with heptadecanoic acid)
PDB Compounds: (A:) DegV family protein

SCOPe Domain Sequences for d5uxya_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5uxya_ c.119.1.0 (A:) automated matches {Eubacterium eligens [TaxId: 39485]}
amrlvadsacdikelrgmvfkavpltistdneefcddgqldihrmldilekhkgrsytac
pgidawleafgdddeifvvtitagmsgtynsamaaravyleehpqakvrvidskstgpqm
riileqlqqmieegkkfeeidgaidaymqktrlfcslkslhnlaqngrvskvvasaaevl
gisvigtasshgtleaigkcrgdkkllvklqallddagyeggklrichvenealadkiad
mikqaygttdvcvykagglcsyyaerggiilscetk

SCOPe Domain Coordinates for d5uxya_:

Click to download the PDB-style file with coordinates for d5uxya_.
(The format of our PDB-style files is described here.)

Timeline for d5uxya_:

  • d5uxya_ appears in periodic updates to SCOPe 2.07 starting on 2018-11-22