Lineage for d6iijb_ (6iij B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409884Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2410108Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2410774Family b.121.4.0: automated matches [191569] (1 protein)
    not a true family
  6. 2410775Protein automated matches [190988] (15 species)
    not a true protein
  7. 3059909Species Coxsackievirus a10 [TaxId:42769] [359971] (4 PDB entries)
  8. 3059933Domain d6iijb_: 6iij B: [359995]
    Other proteins in same PDB: d6iijc_
    automated match to d4jgyb_
    complexed with sph

Details for d6iijb_

PDB Entry: 6iij (more details), 2.84 Å

PDB Description: cryo-em structure of cv-a10 mature virion
PDB Compounds: (B:) vp2

SCOPe Domain Sequences for d6iijb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6iijb_ b.121.4.0 (B:) automated matches {Coxsackievirus a10 [TaxId: 42769]}
sdrvaqltvgnssittqeaanivlaygewpeycpdtdatavdkptrpdvsvnrfytldsk
mwqenstgwywkfpdvlnktgvfgqnaqfhylyrsgfclhvqcnaskfhqgallvavipe
fviagrgsntkpneaphpgftttfpgttgatfhdpyvldsgvplsqaliyphqwvnlrtn
ncatvivpyinavpfdsainhsnfglvvvpvsplkyssgattaipititiaplnsefggl
rqavsq

SCOPe Domain Coordinates for d6iijb_:

Click to download the PDB-style file with coordinates for d6iijb_.
(The format of our PDB-style files is described here.)

Timeline for d6iijb_:

  • d6iijb_ appears in periodic updates to SCOPe 2.07 starting on 2018-11-08