Lineage for d6erna2 (6ern A:148-219)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316392Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 2316654Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families) (S)
  5. 2316731Family a.28.3.0: automated matches [191629] (1 protein)
    not a true family
  6. 2316732Protein automated matches [191156] (10 species)
    not a true protein
  7. 2316748Species Human immunodeficiency virus 1 [TaxId:11676] [233043] (26 PDB entries)
  8. 3059746Domain d6erna2: 6ern A:148-219 [359808]
    Other proteins in same PDB: d6erna1, d6erna3
    automated match to d5hgna2
    complexed with atp

Details for d6erna2

PDB Entry: 6ern (more details), 2.36 Å

PDB Description: hiv hexamer with ligand
PDB Compounds: (A:) gag polyprotein

SCOPe Domain Sequences for d6erna2:

Sequence, based on SEQRES records: (download)

>d6erna2 a.28.3.0 (A:148-219) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}

Sequence, based on observed residues (ATOM records): (download)

>d6erna2 a.28.3.0 (A:148-219) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}

SCOPe Domain Coordinates for d6erna2:

Click to download the PDB-style file with coordinates for d6erna2.
(The format of our PDB-style files is described here.)

Timeline for d6erna2:

  • d6erna2 appears in periodic updates to SCOPe 2.07 starting on 2018-11-08