Lineage for d6dv0b_ (6dv0 B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2391025Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2391026Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2391027Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 proteins)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2391043Protein Human immunodeficiency virus type 1 protease [50632] (9 species)
  7. 2391281Species Human immunodeficiency virus type 1 [TaxId:11676] [50633] (496 PDB entries)
    Uniprot P35963 57-155 ! Uniprot P04587 69-167 ! Uniprot P03366 69-167 ! Uniprot P03367 69-167 ! Uniprot P03368 69-167
  8. 3059478Domain d6dv0b_: 6dv0 B: [359540]
    automated match to d1sdta_
    complexed with cl, ga8, gol, na

Details for d6dv0b_

PDB Entry: 6dv0 (more details), 1.2 Å

PDB Description: hiv-1 wild type protease with grl-02815a, a thiochroman heterocycle with (s)-boc-amine functionality as the p2 ligand
PDB Compounds: (B:) Protease

SCOPe Domain Sequences for d6dv0b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6dv0b_ b.50.1.1 (B:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
pqitlwkrplvtikiggqlkealldtgaddtvieemslpgrwkpkmiggiggfikvrqyd
qiiieiaghkaigtvlvgptpvniigrnlltqigatlnf

SCOPe Domain Coordinates for d6dv0b_:

Click to download the PDB-style file with coordinates for d6dv0b_.
(The format of our PDB-style files is described here.)

Timeline for d6dv0b_:

  • d6dv0b_ appears in periodic updates to SCOPe 2.07 starting on 2018-11-01