Lineage for d6bgtc4 (6bgt C:489-607)

  1. Root: SCOPe 2.07
  2. 2581248Class g: Small proteins [56992] (98 folds)
  3. 2581531Fold g.3: Knottins (small inhibitors, toxins, lectins) [57015] (19 superfamilies)
    disulfide-bound fold; contains beta-hairpin with two adjacent disulfides
  4. 2582446Superfamily g.3.9: Growth factor receptor domain [57184] (2 families) (S)
  5. 2582517Family g.3.9.0: automated matches [232406] (1 protein)
    not a true family
  6. 2582518Protein automated matches [232407] (3 species)
    not a true protein
  7. 2582519Species Human (Homo sapiens) [TaxId:9606] [232408] (15 PDB entries)
  8. 3059442Domain d6bgtc4: 6bgt C:489-607 [359504]
    Other proteins in same PDB: d6bgta1, d6bgta2, d6bgtc1, d6bgtc3
    automated match to d1n8zc4
    complexed with nag; mutant

Details for d6bgtc4

PDB Entry: 6bgt (more details), 2.7 Å

PDB Description: structure of trastuzumab fab mutant in complex with her2 extracellular domain
PDB Compounds: (C:) Receptor tyrosine-protein kinase erbB-2

SCOPe Domain Sequences for d6bgtc4:

Sequence, based on SEQRES records: (download)

>d6bgtc4 g.3.9.0 (C:489-607) automated matches {Human (Homo sapiens) [TaxId: 9606]}
chqlcarghcwgpgptqcvncsqflrgqecveecrvlqglpreyvnarhclpchpecqpq
ngsvtcfgpeadqcvacahykdppfcvarcpsgvkpdlsympiwkfpdeegacqpcpin

Sequence, based on observed residues (ATOM records): (download)

>d6bgtc4 g.3.9.0 (C:489-607) automated matches {Human (Homo sapiens) [TaxId: 9606]}
chqlcarghcwgpgptqcvncsqflrgqecveecrvlqglpreyvnarhclpchpecqpq
ngsvtcfgpeadqcvacahykdppfcvarcpsympiwkfpdeegacqpcpin

SCOPe Domain Coordinates for d6bgtc4:

Click to download the PDB-style file with coordinates for d6bgtc4.
(The format of our PDB-style files is described here.)

Timeline for d6bgtc4:

  • d6bgtc4 appears in periodic updates to SCOPe 2.07 starting on 2018-11-01