Lineage for d6bb3d2 (6bb3 D:160-331)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2556795Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily)
    unusual fold, defines family
  4. 2556796Superfamily d.162.1: LDH C-terminal domain-like [56327] (3 families) (S)
  5. 2556797Family d.162.1.1: Lactate & malate dehydrogenases, C-terminal domain [56328] (5 proteins)
    N-terminal domain is NAD-binding module (alpha/beta Rossmann-fold domain)
    automatically mapped to Pfam PF02866
  6. 2556804Protein Lactate dehydrogenase [56339] (20 species)
  7. 2556875Species Human (Homo sapiens), muscle isoform (M chain) [TaxId:9606] [64445] (29 PDB entries)
  8. 3059053Domain d6bb3d2: 6bb3 D:160-331 [359115]
    Other proteins in same PDB: d6bb3a1, d6bb3b1, d6bb3c1, d6bb3d1
    automated match to d1i10d2
    complexed with d4a, nad, so4

Details for d6bb3d2

PDB Entry: 6bb3 (more details), 2.4 Å

PDB Description: lactate dehydrogenase in complex with inhibitor 3-((2-chlorophenyl) thio)-6-(6-((4-fluorophenyl)amino)pyridin-2-yl)-4-hydroxy-6- (thiophen-3-yl)-5,6-dihydro-2h-pyran-2-one
PDB Compounds: (D:) L-lactate dehydrogenase A chain

SCOPe Domain Sequences for d6bb3d2:

Sequence; same for both SEQRES and ATOM records: (download)

>d6bb3d2 d.162.1.1 (D:160-331) Lactate dehydrogenase {Human (Homo sapiens), muscle isoform (M chain) [TaxId: 9606]}
sgcnldsarfrylmgerlgvhplschgwvlgehgdssvpvwsgmnvagvslktlhpdlgt
dkdkeqwkevhkqvvesayeviklkgytswaiglsvadlaesimknlrrvhpvstmikgl
ygikddvflsvpcilgqngisdlvkvtltseeearlkksadtlwgiqkelqf

SCOPe Domain Coordinates for d6bb3d2:

Click to download the PDB-style file with coordinates for d6bb3d2.
(The format of our PDB-style files is described here.)

Timeline for d6bb3d2:

  • d6bb3d2 appears in periodic updates to SCOPe 2.07 starting on 2018-10-25