Lineage for d6dj5a_ (6dj5 A:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2391025Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2391026Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2391027Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 proteins)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2391043Protein Human immunodeficiency virus type 1 protease [50632] (9 species)
  7. 2391089Species Human immunodeficiency virus 1 [TaxId:11676] [224867] (58 PDB entries)
  8. 3058863Domain d6dj5a_: 6dj5 A: [358925]
    automated match to d3vf7a_
    complexed with cl, g52, gol, na; mutant

Details for d6dj5a_

PDB Entry: 6dj5 (more details), 1.75 Å

PDB Description: hiv-1 protease with mutation l76v in complex with grl-0519 (tris- tetrahydrofuran as p2 ligand)
PDB Compounds: (A:) hiv-1 protease

SCOPe Domain Sequences for d6dj5a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6dj5a_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus 1 [TaxId: 11676]}
pqitlwkrplvtikiggqlkealldtgaddtvieemslpgrwkpkmiggiggfikvrqyd
qiiieiaghkaigtvvvgptpvniigrnlltqigatlnf

SCOPe Domain Coordinates for d6dj5a_:

Click to download the PDB-style file with coordinates for d6dj5a_.
(The format of our PDB-style files is described here.)

Timeline for d6dj5a_:

  • d6dj5a_ appears in periodic updates to SCOPe 2.07 starting on 2018-10-18