Lineage for d6dj1a_ (6dj1 A:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2391025Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2391026Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2391027Family b.50.1.1: Retroviral protease (retropepsin) [50631] (9 proteins)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 2391043Protein Human immunodeficiency virus type 1 protease [50632] (9 species)
  7. 2391281Species Human immunodeficiency virus type 1 [TaxId:11676] [50633] (490 PDB entries)
    Uniprot P35963 57-155 ! Uniprot P04587 69-167 ! Uniprot P03366 69-167 ! Uniprot P03367 69-167 ! Uniprot P03368 69-167
  8. 3058843Domain d6dj1a_: 6dj1 A: [358905]
    automated match to d1sdta_
    complexed with ab1, cl, na

Details for d6dj1a_

PDB Entry: 6dj1 (more details), 1.26 Å

PDB Description: wild-type hiv-1 protease in complex with lopinavir
PDB Compounds: (A:) hiv-1 protease

SCOPe Domain Sequences for d6dj1a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6dj1a_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
pqitlwkrplvtikiggqlkealldtgaddtvieemslpgrwkpkmiggiggfikvrqyd
qiiieiaghkaigtvlvgptpvniigrnlltqigatlnf

SCOPe Domain Coordinates for d6dj1a_:

Click to download the PDB-style file with coordinates for d6dj1a_.
(The format of our PDB-style files is described here.)

Timeline for d6dj1a_:

  • d6dj1a_ appears in periodic updates to SCOPe 2.07 starting on 2018-10-18