Lineage for d6d5ka_ (6d5k A:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2312408Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 2315611Superfamily a.25.2: Cobalamin adenosyltransferase-like [89028] (3 families) (S)
    crossover loop goes across a different side of the 4-helical bundle; no internal metal-binding site
  5. 2315630Family a.25.2.0: automated matches [191442] (1 protein)
    not a true family
  6. 2315631Protein automated matches [190652] (6 species)
    not a true protein
  7. 2315646Species Human (Homo sapiens) [TaxId:9606] [187855] (3 PDB entries)
  8. 3058383Domain d6d5ka_: 6d5k A: [358445]
    automated match to d2idxb_
    complexed with 5ad, atp, b12, epe, mg, so4

Details for d6d5ka_

PDB Entry: 6d5k (more details), 2.85 Å

PDB Description: structure of human atp:cobalamin adenosyltransferase bound to atp, and adenosylcobalamin
PDB Compounds: (A:) Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrial

SCOPe Domain Sequences for d6d5ka_:

Sequence, based on SEQRES records: (download)

>d6d5ka_ a.25.2.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ddqvfeavgttdelssaigfalelvtekghtfaeelqkiqctlqdvgsalatpcssarea
hlkyttfkagpileleqwidkytsqlppltafilpsggkissalhfcravcrraerrvvp
lvqmgetdanvakflnrlsdylftlaryaamkegnqekiymk

Sequence, based on observed residues (ATOM records): (download)

>d6d5ka_ a.25.2.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ddqvfeavgttdelssaigfalelvtekghtfaeelqkiqctlqdvgsalatkyttfkag
pileleqwidkytsqlppltafilpsggkissalhfcravcrraerrvvplvqmgetdan
vakflnrlsdylftlaryaamkegnqekiymk

SCOPe Domain Coordinates for d6d5ka_:

Click to download the PDB-style file with coordinates for d6d5ka_.
(The format of our PDB-style files is described here.)

Timeline for d6d5ka_:

  • d6d5ka_ appears in periodic updates to SCOPe 2.07 starting on 2018-10-11