Lineage for d6dxsd1 (6dxs D:2-341)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2419618Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2420241Family c.1.9.0: automated matches [191327] (1 protein)
    not a true family
  6. 2420242Protein automated matches [190150] (26 species)
    not a true protein
  7. 2420385Species Sphingobium sp. [TaxId:627192] [339663] (4 PDB entries)
  8. 3057910Domain d6dxsd1: 6dxs D:2-341 [357972]
    Other proteins in same PDB: d6dxsa2, d6dxsb2, d6dxsc2, d6dxsd2
    automated match to d4ofca_
    complexed with hj7, zn; mutant

Details for d6dxsd1

PDB Entry: 6dxs (more details), 1.65 Å

PDB Description: crystal structure of the ligj hydratase e284q mutant substrate complex with (3z)-2-keto-4-carboxy-3-hexenedioate
PDB Compounds: (D:) 4-oxalomesaconate hydratase

SCOPe Domain Sequences for d6dxsd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6dxsd1 c.1.9.0 (D:2-341) automated matches {Sphingobium sp. [TaxId: 627192]}
mmiidchghytvlpkahdewreqqkaafkagqpappypeisddeiretieanqlrliker
gadmtifsprasamaphvgdqsvavpwaqacnnliarvvdlfpetfagvcmlpqspeadm
tssiaelercvnelgfigcnlnpdpggghfkhppltdrfwypfyekmveldvpamihvsg
scnpamhatgayylaadtiafmqllqgnlfadfptlrfiiphgggavpyhwgrfrgladm
lkqpsldtllmnnvffdtcvyhqpginlladvidnknilfgsqmvgavrgidpttghyfd
dtkryidaldisdqerhaifegntrrvfprldaklkargl

SCOPe Domain Coordinates for d6dxsd1:

Click to download the PDB-style file with coordinates for d6dxsd1.
(The format of our PDB-style files is described here.)

Timeline for d6dxsd1:

  • d6dxsd1 appears in periodic updates to SCOPe 2.07 starting on 2018-09-27