SCOPe 2.08: Domain d6mdya1: 6mdy A:1-274

Lineage for d6mdya1 (6mdy A:1-274)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.0: automated matches [191319] (1 protein)
   not a true family

6. Protein automated matches [190115] (94 species)
   not a true protein

7. Species Legionella pneumophila [TaxId:272624] [357767] (1 PDB entry)

8. Domain d6mdya1: 6mdy A:1-274 [357780]
   Other proteins in same PDB: d6mdya2, d6mdyb2, d6mdyc2, d6mdyd2
   automated match to d4lu0d_

Details for d6mdya1

PDB Entry: 6mdy, 2.55 Å

PDB Description: crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from legionella pneumophila philadelphia 1

PDB Compounds: (A:) 2-dehydro-3-deoxyphosphooctonate aldolase

SCOPe Domain Sequences for d6mdya1:

Sequence, based on SEQRES records:

>d6mdya1 c.1.10.0 (A:1-274) automated matches {Legionella pneumophila [TaxId: 272624]}
mrlcgfeagldkplfliagpcvieseelaletagylkemcsqlnipfiykssfdkanrss
issyrgpgfekglsilekvksqigvpvltdvhedtplfevssvvdvlqtpaflcrqtnfi
qkvaamnkpvnikkgqflapwemkhviakakaqgneqimacergvsfgynnlvsdmrslv
imretgcpvvydathsvqlpggnngvsggqrefipalaraavavgisglfmethpdpdka
lsdgpnswpldkmkqlleslkaadevykkystdf

Sequence, based on observed residues (ATOM records):

>d6mdya1 c.1.10.0 (A:1-274) automated matches {Legionella pneumophila [TaxId: 272624]}
mrlcgfeagldkplfliagpcvieseelaletagylkemcsqlnipfiykssfpgfekgl
silekvksqigvpvltdvhedtplfevssvvdvlqtpaflcrqtnfiqkvaamnkpvnik
kgqflapwemkhviakakaqgneqimacergvsfgynnlvsdmrslvimretgcpvvyda
thsvqqrefipalaraavavgisglfmethppnswpldkmkqlleslkaadevykkystd
f

Timeline for d6mdya1:

• d6mdya1 first appeared in SCOPe 2.07