SCOPe 2.08: Domain d5nb2a1: 5nb2 A:3-112

Lineage for d5nb2a1 (5nb2 A:3-112)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.169: C-type lectin-like [56435] (1 superfamily)
   unusual fold

4. Superfamily d.169.1: C-type lectin-like [56436] (9 families)

5. Family d.169.1.6: Noncollagenous (NC1) domain of collagen IV [75585] (2 proteins)
   duplication: consists of two subdomains of this fold; segment swapping within and between individual domains
   automatically mapped to Pfam PF01413

6. Protein Noncollagenous (NC1) domain of collagen IV [75586] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [75587] (5 PDB entries)

8. Domain d5nb2a1: 5nb2 A:3-112 [357581]
   automated match to d1li1f1

Details for d5nb2a1

PDB Entry: 5nb2, 2.5 Å

PDB Description: crystal structures of homooligomers of collagen type iv. alpha2nc1

PDB Compounds: (A:) Collagen alpha-2(IV) chain

SCOPe Domain Sequences for d5nb2a1:

Sequence, based on SEQRES records:

>d5nb2a1 d.169.1.6 (A:3-112) Noncollagenous (NC1) domain of collagen IV {Human (Homo sapiens) [TaxId: 9606]}
sigyllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmpf
lycnpgdvcyyasrndksywlsttaplpmmpvaedeikpyisrcsvceap

Sequence, based on observed residues (ATOM records):

>d5nb2a1 d.169.1.6 (A:3-112) Noncollagenous (NC1) domain of collagen IV {Human (Homo sapiens) [TaxId: 9606]}
sigyllvkhsqtdqepmcpvgmnklwsgysllyfeqdlglagsclarfstmpflycnpgd
vcyyasrndksywlsttaplpmmpvaedeikpyisrcsvceap

Timeline for d5nb2a1:

• d5nb2a1 first appeared in SCOPe 2.07