Lineage for d5ni3b_ (5ni3 B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2508387Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2508388Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2508389Family d.22.1.1: Fluorescent proteins [54512] (6 proteins)
  6. 2508393Protein Green fluorescent protein, GFP [54513] (4 species)
  7. 2508399Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (206 PDB entries)
    Uniprot P42212
  8. 3057496Domain d5ni3b_: 5ni3 B: [357558]
    Other proteins in same PDB: d5ni3a_
    automated match to d2fzua_
    complexed with cl, db5, gol, na; mutant

Details for d5ni3b_

PDB Entry: 5ni3 (more details), 1.28 Å

PDB Description: sfgfp 204-204 mutant dimer
PDB Compounds: (B:) Green fluorescent protein

SCOPe Domain Sequences for d5ni3b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ni3b_ d.22.1.1 (B:) Green fluorescent protein, GFP {Jellyfish (Aequorea victoria) [TaxId: 6100]}
kgeelftgvvpilveldgdvnghkfsvrgegegdatngkltlkficttgklpvpwptlvt
tlgygvqcfsrypdhmkrhdffksampegyvqertisfkddgtyktraevkfegdtlvnr
ielkgidfkedgnilghkleynfnshnvyitadkqkngikanfkirhnvedgsvqladhy
qqntpigdgpvllpdnhylstfsvlskdpnekrdhmvllefvtaagithgm

SCOPe Domain Coordinates for d5ni3b_:

Click to download the PDB-style file with coordinates for d5ni3b_.
(The format of our PDB-style files is described here.)

Timeline for d5ni3b_:

  • d5ni3b_ appears in periodic updates to SCOPe 2.07 starting on 2018-09-13