Lineage for d6d88d1 (6d88 D:1-243)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2445156Fold c.32: Tubulin nucleotide-binding domain-like [52489] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 2445157Superfamily c.32.1: Tubulin nucleotide-binding domain-like [52490] (2 families) (S)
    automatically mapped to Pfam PF00091
  5. 2445158Family c.32.1.1: Tubulin, GTPase domain [52491] (4 proteins)
  6. 2445283Protein automated matches [226837] (7 species)
    not a true protein
  7. 2445466Species Pig (Sus scrofa) [TaxId:9823] [278808] (24 PDB entries)
  8. 3057222Domain d6d88d1: 6d88 D:1-243 [357284]
    Other proteins in same PDB: d6d88a2, d6d88b2, d6d88c2, d6d88d2, d6d88e_, d6d88f1, d6d88f2, d6d88f3
    automated match to d4drxb1
    complexed with acp, ca, g9k, gdp, gtp, mes, mg

Details for d6d88d1

PDB Entry: 6d88 (more details), 2.85 Å

PDB Description: tubulin-rb3_sld-ttl in complex with compound 13f
PDB Compounds: (D:) Tubulin beta chain

SCOPe Domain Sequences for d6d88d1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6d88d1 c.32.1.1 (D:1-243) automated matches {Pig (Sus scrofa) [TaxId: 9823]}
mreivhiqagqcgnqigakfwevisdehgidptgsyhgdsdlqlerinvyyneatgnkyv
prailvdlepgtmdsvrsgpfgqifrpdnfvfgqsgagnnwakghytegaelvdsvldvv
rkesescdclqgfqlthslgggtgsgmgtlliskireeypdrimntfsvmpspkvsdtvv
epynatlsvhqlventdetycidnealydicfrtlklttptygdlnhlvsatmsgvttcl
rfp

SCOPe Domain Coordinates for d6d88d1:

Click to download the PDB-style file with coordinates for d6d88d1.
(The format of our PDB-style files is described here.)

Timeline for d6d88d1:

  • d6d88d1 appears in periodic updates to SCOPe 2.07 starting on 2018-09-13