Lineage for d6axra1 (6axr A:1-147)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2326304Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
    core: 5 helices; bundle
  4. 2326305Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (2 families) (S)
  5. 2326306Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (6 proteins)
  6. 2326345Protein HIV-1 capsid protein [47945] (1 species)
  7. 2326346Species Human immunodeficiency virus type 1 [TaxId:11676] [47946] (62 PDB entries)
  8. 3057206Domain d6axra1: 6axr A:1-147 [357268]
    Other proteins in same PDB: d6axra2
    automated match to d4xfxa1
    complexed with cl, iod; mutant

Details for d6axra1

PDB Entry: 6axr (more details), 2.3 Å

PDB Description: structure of the p122a mutant of the hiv-1 capsid protein
PDB Compounds: (A:) hiv-1 capsid protein

SCOPe Domain Sequences for d6axra1:

Sequence, based on SEQRES records: (download)

>d6axra1 a.73.1.1 (A:1-147) HIV-1 capsid protein {Human immunodeficiency virus type 1 [TaxId: 11676]}
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
napipvgeiykrwiilglnkivrmysp

Sequence, based on observed residues (ATOM records): (download)

>d6axra1 a.73.1.1 (A:1-147) HIV-1 capsid protein {Human immunodeficiency virus type 1 [TaxId: 11676]}
pivqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaa
mqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmthnapip
vgeiykrwiilglnkivrmysp

SCOPe Domain Coordinates for d6axra1:

Click to download the PDB-style file with coordinates for d6axra1.
(The format of our PDB-style files is described here.)

Timeline for d6axra1:

  • d6axra1 appears in periodic updates to SCOPe 2.07 starting on 2018-09-13

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Domains from same chain:
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d6axra2