Lineage for d5y9rd_ (5y9r D:)

  1. Root: SCOPe 2.07
  2. 2590057Class h: Coiled coil proteins [57942] (7 folds)
  3. 2590058Fold h.1: Parallel coiled-coil [57943] (41 superfamilies)
    this is not a true fold; includes oligomers of shorter identical helices
  4. 2590957Superfamily h.1.13: Rotavirus nonstructural proteins [58030] (2 families) (S)
    not a true superfamily
  5. 2590958Family h.1.13.1: NSP4 oligomerization domain [58031] (2 proteins)
  6. 2590965Protein automated matches [254616] (6 species)
    not a true protein
  7. 3048590Species Bovine rotavirus g10 [TaxId:195477] [348652] (3 PDB entries)
  8. 3057063Domain d5y9rd_: 5y9r D: [357125]
    Other proteins in same PDB: d5y9rc2
    automated match to d3miwd_
    complexed with cd, edo, ni

Details for d5y9rd_

PDB Entry: 5y9r (more details), 2.2 Å

PDB Description: crystal structure of the oligomerization domain of nsp4 from rotavirus strain mf66
PDB Compounds: (D:) Nonstructural protein 4

SCOPe Domain Sequences for d5y9rd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5y9rd_ h.1.13.1 (D:) automated matches {Bovine rotavirus g10 [TaxId: 195477]}
iekqmdrvvkemrrqlemidklttreieqvellkrihdklvvqs

SCOPe Domain Coordinates for d5y9rd_:

Click to download the PDB-style file with coordinates for d5y9rd_.
(The format of our PDB-style files is described here.)

Timeline for d5y9rd_:

  • d5y9rd_ appears in periodic updates to SCOPe 2.07 starting on 2018-09-06