Lineage for d6gmqd_ (6gmq D:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2931196Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2931197Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2931198Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2931223Protein Elongin B [54246] (2 species)
  7. 2931224Species Human (Homo sapiens) [TaxId:9606] [54247] (53 PDB entries)
  8. 2931376Domain d6gmqd_: 6gmq D: [356447]
    Other proteins in same PDB: d6gmqb1, d6gmqb2, d6gmqc_, d6gmqe1, d6gmqe2, d6gmqf_, d6gmqh_, d6gmqi_, d6gmqk1, d6gmqk2, d6gmql_
    automated match to d1lqba_
    complexed with act, f4k, ipa

Details for d6gmqd_

PDB Entry: 6gmq (more details), 2.76 Å

PDB Description: pvhl:elob:eloc in complex with (4-(1h-pyrrol-1-yl)phenyl)methanol
PDB Compounds: (D:) Elongin-B

SCOPe Domain Sequences for d6gmqd_:

Sequence, based on SEQRES records: (download)

>d6gmqd_ d.15.1.1 (D:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafraddtfealciepfssppelpdv

Sequence, based on observed residues (ATOM records): (download)

>d6gmqd_ d.15.1.1 (D:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglaffealciepfssppelpdv

SCOPe Domain Coordinates for d6gmqd_:

Click to download the PDB-style file with coordinates for d6gmqd_.
(The format of our PDB-style files is described here.)

Timeline for d6gmqd_: