SCOPe 2.07: Domain d6dbga1: 6dbg A:36-240

Lineage for d6dbga1 (6dbg A:36-240)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
   2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

4. Superfamily c.10.2: L domain-like [52058] (9 families)
   less regular structure consisting of variable repeats

5. Family c.10.2.1: Internalin LRR domain [52059] (4 proteins)
   capped at the N-end with a truncated EF-hand subdomain
   this is a repeat family; one repeat unit is 2omx A:261-239 found in domain

6. Protein automated matches [226952] (2 species)
   not a true protein

7. Species Listeria monocytogenes [TaxId:169963] [225326] (6 PDB entries)

8. Domain d6dbga1: 6dbg A:36-240 [354933]
   Other proteins in same PDB: d6dbga2, d6dbgb2, d6dbgc_, d6dbgd_
   automated match to d2uzxa1

Details for d6dbga1

PDB Entry: 6dbg, 1.51 Å

PDB Description: crystal structure of vhh r303 in complex with inlb-lrr-ir

PDB Compounds: (A:) internalin b

SCOPe Domain Sequences for d6dbga1:

Sequence; same for both SEQRES and ATOM records:

>d6dbga1 c.10.2.1 (A:36-240) automated matches {Listeria monocytogenes [TaxId: 169963]}
etitvptpikqifsddafaetikdnlkkksvtdavtqnelnsidqiiannsdiksvqgiq
ylpnvtklflngnkltdikplanlknlgwlfldenkvkdlsslkdlkklkslslehngis
dinglvhlpqleslylgnnkitditvlsrltkldtlslednqisdivplagltklqnlyl
sknhisdlralaglknldvlelfsq

Timeline for d6dbga1:

• d6dbga1 is new in SCOPe 2.07-stable
  
• d6dbga1 appears in the current release, SCOPe 2.08