Lineage for d5yt6g1 (5yt6 G:1-74)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (296 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 3054708Domain d5yt6g1: 5yt6 G:1-74 [354770]
    Other proteins in same PDB: d5yt6a2, d5yt6c2, d5yt6e2, d5yt6g2
    automated match to d4k1rb_
    complexed with edo, gol, so4, zn

Details for d5yt6g1

PDB Entry: 5yt6 (more details), 1.5 Å

PDB Description: crystal structure of tax1bp1 ubz2 in complex with mono-ubiquitin
PDB Compounds: (G:) Ubiquitin

SCOPe Domain Sequences for d5yt6g1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5yt6g1 d.15.1.1 (G:1-74) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d5yt6g1:

Click to download the PDB-style file with coordinates for d5yt6g1.
(The format of our PDB-style files is described here.)

Timeline for d5yt6g1:

  • d5yt6g1 is new in SCOPe 2.07-stable