Lineage for d6aqrd_ (6aqr D:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (296 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 3054201Domain d6aqrd_: 6aqr D: [354263]
    Other proteins in same PDB: d6aqrb_
    automated match to d1ogwa_
    complexed with zn

Details for d6aqrd_

PDB Entry: 6aqr (more details), 2.1 Å

PDB Description: saga dub module ubp8(c146a)/sgf11/sus1/sgf73 bound to monoubiquitin
PDB Compounds: (D:) Polyubiquitin-C

SCOPe Domain Sequences for d6aqrd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6aqrd_ d.15.1.1 (D:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

SCOPe Domain Coordinates for d6aqrd_:

Click to download the PDB-style file with coordinates for d6aqrd_.
(The format of our PDB-style files is described here.)

Timeline for d6aqrd_:

  • d6aqrd_ is new in SCOPe 2.07-stable