Lineage for Species: Escherichia coli [TaxId: 83333]

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2939535Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 2939536Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 2939537Family d.21.1.1: Diaminopimelate epimerase [54507] (2 proteins)
    automatically mapped to Pfam PF01678
  6. 2939586Protein automated matches [352381] (2 species)
    not a true protein
  7. 2939592Species Escherichia coli [TaxId:83333] [353391] (4 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 83333]:

  1. Domain(s) for 5ygu:
    1. 2939595Domain d5ygua1: 5ygu A:1-130 [353392]
      automated match to d4ijza1
      protein/RNA complex; complexed with iod, tla
    2. 2939596Domain d5ygua2: 5ygu A:131-274 [353393]
      automated match to d4ijza2
      protein/RNA complex; complexed with iod, tla
  2. Domain(s) for 6vck:
    1. 2939599Domain d6vcka1: 6vck A:1-130 [380279]
      Other proteins in same PDB: d6vcka3
      automated match to d4ijza1
      protein/RNA complex; complexed with cl, f, gdp, mg
    2. 2939600Domain d6vcka2: 6vck A:131-274 [380280]
      Other proteins in same PDB: d6vcka3
      automated match to d4ijza2
      protein/RNA complex; complexed with cl, f, gdp, mg
  3. Domain(s) for 6vcl:
    1. 2939593Domain d6vcla1: 6vcl A:1-130 [380246]
      Other proteins in same PDB: d6vcla3
      automated match to d4ijza1
      protein/RNA complex; complexed with 0o2, cl, f, gol, mg
    2. 2939594Domain d6vcla2: 6vcl A:131-274 [380247]
      Other proteins in same PDB: d6vcla3
      automated match to d4ijza2
      protein/RNA complex; complexed with 0o2, cl, f, gol, mg
  4. Domain(s) for 6vcm:
    1. 2939597Domain d6vcma1: 6vcm A:1-130 [380250]
      Other proteins in same PDB: d6vcma3
      automated match to d4ijza1
      protein/RNA complex; complexed with cl, f, gtp, mg
    2. 2939598Domain d6vcma2: 6vcm A:131-274 [380251]
      Other proteins in same PDB: d6vcma3
      automated match to d4ijza2
      protein/RNA complex; complexed with cl, f, gtp, mg

More info for Species Escherichia coli [TaxId:83333] from d.21.1.1 automated matches

Timeline for Species Escherichia coli [TaxId:83333] from d.21.1.1 automated matches: