Lineage for d1fdi_2 (1fdi 1-564)

  1. Root: SCOP 1.71
  2. 570216Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
  3. 592256Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
    contains of two similar intertwined domains related by pseudo dyad; duplication
    core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451
  4. 592257Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (1 family) (S)
    molybdopterine enzyme
  5. 592258Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (9 proteins)
    domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase
  6. 592285Protein Formate dehydrogenase H [53711] (1 species)
  7. 592286Species Escherichia coli [TaxId:562] [53712] (3 PDB entries)
  8. 592289Domain d1fdi_2: 1fdi 1-564 [35326]
    Other proteins in same PDB: d1fdi_1
    complexed with 6mo, cse, fs4, mgd, no2

Details for d1fdi_2

PDB Entry: 1fdi (more details), 2.9 Å

PDB Description: oxidized form of formate dehydrogenase h from e. coli complexed with the inhibitor nitrite

SCOP Domain Sequences for d1fdi_2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1fdi_2 c.81.1.1 (1-564) Formate dehydrogenase H {Escherichia coli}
mkkvvtvcpycasgckinlvvdngkivraeaaqgktnqgtlclkgyygwdfindtqiltp
rlktpmirrqrggklepvswdealnyvaerlsaikekygpdaiqttgssrgtgnetnyvm
qkfaravigtnnvdccarvchgpsvaglhqsvgngamsnaineidntdlvfvfgynpads
hpivanhvinakrngakiivcdprkietariadmhialkngsniallnamghviieenly
dkafvasrtegfeeyrkivegytpesveditgvsaseirqaarmyaqaksaailwgmgvt
qfyqgvetvrsltslamltgnlgkphagvnpvrgqnnvqgacdmgalpdtypgyqyvkdp
anrekfakawgveslpahtgyriselphraahgevraayimgedplqtdaelsavrkafe
dlelvivqdifmtktasaadvilpstswgehegvftaadrgfqrffkavepkwdlktdwq
iiseiatrmgypmhynntqeiwdelrhlcpdfygatyekmgelgfiqwpcrdtsdadqgt
sylfkekfdtpnglaqfftcdwva

SCOP Domain Coordinates for d1fdi_2:

Click to download the PDB-style file with coordinates for d1fdi_2.
(The format of our PDB-style files is described here.)

Timeline for d1fdi_2:

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Domains from same chain:
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d1fdi_1