SCOPe 2.05: Domain d1fdoa2: 1fdo A:1-564

Lineage for d1fdoa2 (1fdo A:1-564)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
   contains of two similar intertwined domains related by pseudo dyad; duplication
   core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451

4. Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (1 family)
   molybdopterine enzyme

5. Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (11 proteins)
   domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase

6. Protein Formate dehydrogenase H [53711] (1 species)

7. Species Escherichia coli [TaxId:562] [53712] (4 PDB entries)

8. Domain d1fdoa2: 1fdo A:1-564 [35325]
   Other proteins in same PDB: d1fdoa1
   complexed with 6mo, mgd, sf4

Details for d1fdoa2

PDB Entry: 1fdo, 2.8 Å

PDB Description: oxidized form of formate dehydrogenase h from e. coli

PDB Compounds: (A:) formate dehydrogenase h

SCOPe Domain Sequences for d1fdoa2:

Sequence; same for both SEQRES and ATOM records:

>d1fdoa2 c.81.1.1 (A:1-564) Formate dehydrogenase H {Escherichia coli [TaxId: 562]}
mkkvvtvcpycasgckinlvvdngkivraeaaqgktnqgtlclkgyygwdfindtqiltp
rlktpmirrqrggklepvswdealnyvaerlsaikekygpdaiqttgssrgtgnetnyvm
qkfaravigtnnvdccarvahgpsvaglhqsvgngamsnaineidntdlvfvfgynpads
hpivanhvinakrngakiivcdprkietariadmhialkngsniallnamghviieenly
dkafvasrtegfeeyrkivegytpesveditgvsaseirqaarmyaqaksaailwgmgvt
qfyqgvetvrsltslamltgnlgkphagvnpvrgqnnvqgacdmgalpdtypgyqyvkdp
anrekfakawgveslpahtgyriselphraahgevraayimgedplqtdaelsavrkafe
dlelvivqdifmtktasaadvilpstswgehegvftaadrgfqrffkavepkwdlktdwq
iiseiatrmgypmhynntqeiwdelrhlcpdfygatyekmgelgfiqwpcrdtsdadqgt
sylfkekfdtpnglaqfftcdwva

Timeline for d1fdoa2:

• d1fdoa2 first appeared (with stable ids) in SCOP 1.55, called d1fdo_2
  
• d1fdoa2 appears in SCOPe 2.04
  
• d1fdoa2 appears in SCOPe 2.06
  
• d1fdoa2 appears in the current release, SCOPe 2.08