SCOPe 2.08: Domain d6cssb_: 6css B:

Lineage for d6cssb_ (6css B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.42: Arginase/deacetylase [52767] (1 superfamily)
   3 layers: a/b/a, parallel beta-sheet of 8 strands, order 21387456

4. Superfamily c.42.1: Arginase/deacetylase [52768] (3 families)

5. Family c.42.1.0: automated matches [191435] (1 protein)
   not a true family

6. Protein automated matches [190626] (14 species)
   not a true protein

7. Species Zebrafish (Danio rerio) [TaxId:7955] [319911] (55 PDB entries)

8. Domain d6cssb_: 6css B: [352729]
   automated match to d5g0ha_
   complexed with edo, fbj, k, zn

Details for d6cssb_

PDB Entry: 6css, 1.7 Å

PDB Description: crystal structure of danio rerio histone deacetylase 6 catalytic domain 2 in complex with cyclopentenylhydroxamate

PDB Compounds: (B:) Hdac6 protein

SCOPe Domain Sequences for d6cssb_:

Sequence; same for both SEQRES and ATOM records:

>d6cssb_ c.42.1.0 (B:) automated matches {Zebrafish (Danio rerio) [TaxId: 7955]}
spitglvydqrmmlhhnmwdshhpelpqrisrifsrheelrllsrchriparlateeela
lchsskhisiikssehmkprdlnrlgdeynsifisnesytcallaagscfnsaqailtgq
vrnavaivrppghhaekdtacgfcffntaaltaryaqsitreslrvlivdwdvhhgngtq
hifeeddsvlyislhryedgaffpnsedanydkvglgkgrgynvnipwnggkmgdpeyma
afhhlvmpiarefapelvlvsagfdaargdplggfqvtpegyahlthqlmslaagrvlii
leggynltsisesmsmctsmllgdsppsldhltplktsatvsinnvlrahapfwsslr

Timeline for d6cssb_:

• d6cssb_ first appeared in SCOPe 2.07