Lineage for d5nh0b_ (5nh0 B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2387558Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2387559Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2389935Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 protein domains)
  6. 2389994Protein Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979] (6 species)
    contains an extra alpha-helical domain
  7. 2390000Species Human coronavirus [TaxId:443239] [188597] (4 PDB entries)
  8. 3052153Domain d5nh0b_: 5nh0 B: [352215]
    automated match to d3tloa_
    complexed with 8x8, dms, gol

Details for d5nh0b_

PDB Entry: 5nh0 (more details), 2.35 Å

PDB Description: structure of human coronavirus nl63 main protease in complex with the alpha-ketoamide tert-butyl ((s)-4-(benzylamino)-3,4-dioxo-1-((s)-2- oxopyrrolidin-3-yl)b- utan-2-yl)carbamate (tert-butyl -glnlactam-co- co-nh-benzyl)
PDB Compounds: (B:) Replicase polyprotein 1ab

SCOPe Domain Sequences for d5nh0b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5nh0b_ b.47.1.4 (B:) Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) {Human coronavirus [TaxId: 443239]}
sglkkmaqpsgcvercvvrvcygstvlngvwlgdtvtcprhviapsttvlidydhaystm
rlhnfsvshngvflgvvgvtmhgsvlrikvsqsnvhtpkhvfktlkpgdsfnilacyegi
asgvfgvnlrtnftikgsfingacgspgynvrndgtvefcylhqielgsgahvgsdftgs
vygnfddqpslqvesanlmlsdnvvaflyaallngcrwwlcstrvnvdgfnewamangyt
svssvecysilaaktgvsveqllasiqhlhegfggknilgysslcdeftlaevvkqmygv

SCOPe Domain Coordinates for d5nh0b_:

Click to download the PDB-style file with coordinates for d5nh0b_.
(The format of our PDB-style files is described here.)

Timeline for d5nh0b_:

  • d5nh0b_ appears in periodic updates to SCOPe 2.07 starting on 2018-05-17