Lineage for d5vsub_ (5vsu B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2380450Fold b.38: Sm-like fold [50181] (5 superfamilies)
    core: barrel, open; n*=4, S*=8; meander; SH3-like topology
  4. 2380451Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families) (S)
  5. 2381067Family b.38.1.0: automated matches [191538] (1 protein)
    not a true family
  6. 2381068Protein automated matches [190914] (13 species)
    not a true protein
  7. 2381121Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [228531] (5 PDB entries)
  8. 3051907Domain d5vsub_: 5vsu B: [351969]
    Other proteins in same PDB: d5vsuc2
    automated match to d4n0ac_

Details for d5vsub_

PDB Entry: 5vsu (more details), 3.1 Å

PDB Description: structure of yeast u6 snrnp with 2'-phosphate terminated u6 rna
PDB Compounds: (B:) u6 snrna-associated sm-like protein lsm2

SCOPe Domain Sequences for d5vsub_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vsub_ b.38.1.0 (B:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
mgsmlffsffktlvdqevvvelkndieikgtlqsvdqflnlkldnisctdekkyphlgsv
rnifirgstvryvylnknmvdtnllqdatrrevmterk

SCOPe Domain Coordinates for d5vsub_:

Click to download the PDB-style file with coordinates for d5vsub_.
(The format of our PDB-style files is described here.)

Timeline for d5vsub_:

  • d5vsub_ appears in periodic updates to SCOPe 2.07 starting on 2018-05-10