Lineage for d5yoyl1 (5yoy L:6-157)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2372079Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2372080Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2372081Family b.22.1.1: TNF-like [49843] (15 protein domains)
  6. 2372278Protein Tumor necrosis factor (TNF) [49848] (2 species)
  7. 2372279Species Human (Homo sapiens) [TaxId:9606] [49849] (20 PDB entries)
  8. 3051894Domain d5yoyl1: 5yoy L:6-157 [351956]
    Other proteins in same PDB: d5yoya2, d5yoyb2, d5yoyc2, d5yoyd_, d5yoye_, d5yoyf_, d5yoyg_, d5yoyh_, d5yoyi_, d5yoyj2, d5yoyk2, d5yoyl2, d5yoym_, d5yoyn_, d5yoyo_, d5yoyp_, d5yoyq_, d5yoyr_
    automated match to d1a8ma_

Details for d5yoyl1

PDB Entry: 5yoy (more details), 2.73 Å

PDB Description: crystal structure of the human tumor necrosis factor in complex with golimumab fv
PDB Compounds: (L:) Tumor necrosis factor

SCOPe Domain Sequences for d5yoyl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5yoyl1 b.22.1.1 (L:6-157) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
rtpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfk
gqgcpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfq
lekgdrlsaeinrpdyldfaesgqvyfgiial

SCOPe Domain Coordinates for d5yoyl1:

Click to download the PDB-style file with coordinates for d5yoyl1.
(The format of our PDB-style files is described here.)

Timeline for d5yoyl1:

  • d5yoyl1 appears in periodic updates to SCOPe 2.07 starting on 2018-05-10