Lineage for d5yo3a1 (5yo3 A:1-106)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2311272Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 2311322Superfamily a.24.3: Cytochromes [47175] (3 families) (S)
    Heme-containing proteins
  5. 2311323Family a.24.3.1: Cytochrome b562 [47176] (2 protein domains)
    automatically mapped to Pfam PF07361
  6. 2311324Protein Cytochrome b562 [47177] (1 species)
  7. 2311325Species Escherichia coli [TaxId:562] [47178] (42 PDB entries)
  8. 3051883Domain d5yo3a1: 5yo3 A:1-106 [351945]
    Other proteins in same PDB: d5yo3a2
    automated match to d1m6ta_
    complexed with so4

Details for d5yo3a1

PDB Entry: 5yo3 (more details), 1.7 Å

PDB Description: crystal structure of b562ril with engineered disulfide bond v16c-a29c
PDB Compounds: (A:) Soluble cytochrome b562

SCOPe Domain Sequences for d5yo3a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5yo3a1 a.24.3.1 (A:1-106) Cytochrome b562 {Escherichia coli [TaxId: 562]}
adlednwetlndnlkciekadnaaqvkdcltkmraaaldaqkatppkledkspdspemkd
frhgfdilvgqiddalklanegkvkeaqaaaeqlkttrnayiqkyl

SCOPe Domain Coordinates for d5yo3a1:

Click to download the PDB-style file with coordinates for d5yo3a1.
(The format of our PDB-style files is described here.)

Timeline for d5yo3a1:

  • d5yo3a1 appears in periodic updates to SCOPe 2.07 starting on 2018-05-10

View in 3D
Domains from same chain:
(mouse over for more information)
d5yo3a2