Lineage for d5xjlb_ (5xjl B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2380450Fold b.38: Sm-like fold [50181] (5 superfamilies)
    core: barrel, open; n*=4, S*=8; meander; SH3-like topology
  4. 2380451Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families) (S)
  5. 2380452Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (11 proteins)
    forms homo and heteroheptameric ring structures
    Pfam PF01423
  6. 2380665Protein D2 core SNRNP protein [50186] (3 species)
    3jb9 chains G and l are D2 subunits from fission yeast; not included because sids are not case sensitive
  7. 2380666Species Human (Homo sapiens) [TaxId:9606] [50187] (11 PDB entries)
  8. 3051655Domain d5xjlb_: 5xjl B: [351717]
    Other proteins in same PDB: d5xjla_, d5xjle_, d5xjlf_, d5xjlg_
    automated match to d1b34b_

Details for d5xjlb_

PDB Entry: 5xjl (more details), 2.5 Å

PDB Description: crystal structure of the gemin2-binding domain of smn, gemin2 in complex with smd1/d2/f/e/g from human
PDB Compounds: (B:) Small nuclear ribonucleoprotein Sm D2

SCOPe Domain Sequences for d5xjlb_:

Sequence, based on SEQRES records: (download)

>d5xjlb_ b.38.1.1 (B:) D2 core SNRNP protein {Human (Homo sapiens) [TaxId: 9606]}

Sequence, based on observed residues (ATOM records): (download)

>d5xjlb_ b.38.1.1 (B:) D2 core SNRNP protein {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d5xjlb_:

Click to download the PDB-style file with coordinates for d5xjlb_.
(The format of our PDB-style files is described here.)

Timeline for d5xjlb_: