Lineage for d6fmia_ (6fmi A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501137Protein Elongin B [54246] (2 species)
  7. 2501138Species Human (Homo sapiens) [TaxId:9606] [54247] (49 PDB entries)
  8. 3050794Domain d6fmia_: 6fmi A: [350856]
    Other proteins in same PDB: d6fmib_, d6fmic_, d6fmie_, d6fmif_
    automated match to d1lqba_
    complexed with dv2

Details for d6fmia_

PDB Entry: 6fmi (more details), 2.8 Å

PDB Description: pvhl:elob:eloc in complex with n-((s)-1-((2s,4r)-4-hydroxy-2-((4-(4- methylthiazol-5-yl)benzyl)carbamothioyl) pyrrolidin-1-yl)-1- oxopropan-2-yl)acetamide (ligand 2)
PDB Compounds: (A:) Elongin-B

SCOPe Domain Sequences for d6fmia_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6fmia_ d.15.1.1 (A:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafraddtfealciepfssppelpdvm

SCOPe Domain Coordinates for d6fmia_:

Click to download the PDB-style file with coordinates for d6fmia_.
(The format of our PDB-style files is described here.)

Timeline for d6fmia_:

  • d6fmia_ appears in periodic updates to SCOPe 2.07 starting on 2018-04-12