Lineage for d6cmma_ (6cmm A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2542179Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
    consists of two alpha+beta domains, C-terminal domain is mostly alpha helical
  4. 2542180Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families) (S)
    shares functional and structural similarities with the ATP-grasp fold and PIPK
  5. 2546221Family d.144.1.0: automated matches [191359] (1 protein)
    not a true family
  6. 2546222Protein automated matches [190417] (28 species)
    not a true protein
  7. 2546365Species Human (Homo sapiens) [TaxId:9606] [187294] (1001 PDB entries)
  8. 3050693Domain d6cmma_: 6cmm A: [350755]
    automated match to d6bu6a_
    complexed with act, f7d, peg, so4

Details for d6cmma_

PDB Entry: 6cmm (more details), 2.1 Å

PDB Description: crystal structure of the human vaccinia-related kinase bound to a n,n- dipropynyl-dihydropteridine inhibitor
PDB Compounds: (A:) Serine/threonine-protein kinase VRK1

SCOPe Domain Sequences for d6cmma_:

Sequence, based on SEQRES records: (download)

>d6cmma_ d.144.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aeqfavgeiitdmaaaawkvglpigqggfgciyladmnssesvgsdapcvvkvepsdngp
lftelkfyqraakpeqiqkwirtrklkylgvpkywgsglhdkngksyrfmimdrfgsdlq
kiyeanakrfsrktvlqlslrildileyiheheyvhgdikasnlllnyknpdqvylvdyg
layrycpegvhkayaadpkrchdgtieftsidahngvapsrrgdleilgycmiqwltghl
pwednlkdpkyvrdskiryreniaslmdkcfpaanapgeiakymetvklldytekplyen
lrdillqglkaigskddgkldl

Sequence, based on observed residues (ATOM records): (download)

>d6cmma_ d.144.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aeqfavgeiitdmaaaawkvglpigqfgciyladmnssesvgsdapcvvkvepsdngplf
telkfyqraakpeqiqkwirtrklkylgvpkywgsglhdkngksyrfmimdrfgsdlqki
yeanakrfsrktvlqlslrildileyiheheyvhgdikasnlllnyknpdqvylvdygla
yrycpegvhkayaadpkrchdgtieftsidahngvapsrrgdleilgycmiqwltghlpw
ednlkdpkyvrdskiryreniaslmdkcfanapgeiakymetvklldytekplyenlrdi
llqglkaigskddgkldl

SCOPe Domain Coordinates for d6cmma_:

Click to download the PDB-style file with coordinates for d6cmma_.
(The format of our PDB-style files is described here.)

Timeline for d6cmma_:

  • d6cmma_ appears in periodic updates to SCOPe 2.07 starting on 2018-04-08