Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3019769Fold e.26: Prismane protein-like [56820] (1 superfamily)
    3 domains: (1) spectrin repeat-like 3-helical bundle; (2 and 3) alpha/beta: Rossmann-fold topology
  4. 3019770Superfamily e.26.1: Prismane protein-like [56821] (4 families) (S)
  5. 3019872Family e.26.1.0: automated matches [350299] (1 protein)
    not a true family
  6. 3019873Protein automated matches [350300] (5 species)
    not a true protein

Species:

  1. 3019874Carboxydothermus hydrogenoformans [TaxId:129958] [350301] (1 PDB entry)
  2. 3019878Clostridium autoethanogenum [TaxId:1341692] [396484] (3 PDB entries)
    1. Domains for 6ytt:
      1. 3019885Domain d6yttb_: 6ytt B: [396501]
        automated match to d2yivx_
        complexed with f, gol, na, ni, pe4, sf4, xcc
      2. 3019886Domain d6yttc_: 6ytt C: [396553]
        automated match to d2yivx_
        complexed with f, gol, na, ni, pe4, sf4, xcc
    2. Domains for 6yu9:
      1. 3019879Domain d6yu9a_: 6yu9 A: [396485]
        automated match to d2yivx_
        complexed with act, cl, edo, sf4, xcc
      2. 3019880Domain d6yu9b_: 6yu9 B: [396557]
        automated match to d2yivx_
        complexed with act, cl, edo, sf4, xcc
      3. 3019881Domain d6yu9c_: 6yu9 C: [396496]
        automated match to d2yivx_
        complexed with act, cl, edo, sf4, xcc
      4. 3019882Domain d6yu9d_: 6yu9 D: [396497]
        automated match to d2yivx_
        complexed with act, cl, edo, sf4, xcc
    3. Domains for 6yua:
      1. 3019883Domain d6yuab_: 6yua B: [396519]
        automated match to d2yivx_
        complexed with edo, gol, mg, sf4, xcc
      2. 3019884Domain d6yuac_: 6yua C: [396535]
        automated match to d2yivx_
        complexed with edo, gol, mg, sf4, xcc
  3. 3019887Desulfovibrio vulgaris [TaxId:882] [420070] (4 PDB entries)
    1. Domains for 6vwy:
      1. 3019888Domain d6vwya_: 6vwy A: [416965]
        automated match to d6yuab_
        complexed with cuv, gol, sf4, xcc
      2. 3019889Domain d6vwyb_: 6vwy B: [416966]
        automated match to d6yuab_
        complexed with cuv, gol, sf4, xcc
    2. Domains for 6vwz:
      1. 3019892Domain d6vwza_: 6vwz A: [416967]
        automated match to d6yuab_
        complexed with cuv, gol, sf4
      2. 3019893Domain d6vwzb_: 6vwz B: [416968]
        automated match to d6yuab_
        complexed with cuv, gol, sf4
    3. Domains for 6vx0:
      1. 3019890Domain d6vx0a_: 6vx0 A: [416969]
        automated match to d6yuab_
        complexed with cuv, gol, sf4
      2. 3019891Domain d6vx0b_: 6vx0 B: [416970]
        automated match to d6yuab_
        complexed with cuv, gol, sf4
    4. Domains for 6vx1:
      1. 3019894Domain d6vx1a_: 6vx1 A: [416971]
        automated match to d6yuab_
        complexed with cuv, sf4
      2. 3019895Domain d6vx1b_: 6vx1 B: [416972]
        automated match to d6yuab_
        complexed with cuv, sf4
  4. 3019896Thermococcus sp. [TaxId:246969] [395653] (1 PDB entry)
  5. 3084299Carboxydothermus hydrogenoformans [TaxId:246194] [420616] (5 PDB entries)
    1. Domains for 7b7q:
      1. 3084300Domain d7b7qa_: 7b7q A: [420617]
        automated match to d6t7ja_
        complexed with css, fes, peg, sf4, t2n, tam
      2. 3084308Domain d7b7qb_: 7b7q B: [420625]
        automated match to d6t7ja_
        complexed with css, fes, peg, sf4, t2n, tam
    2. Domains for 7b7t:
      1. 3084545Domain d7b7tb_: 7b7t B: [420862]
        automated match to d6t7ja_
        complexed with bu3, fes, peg, sf3, sf4
      2. 3084775Domain d7b7ta_: 7b7t A: [421092]
        automated match to d6t7ja_
        complexed with bu3, fes, peg, sf3, sf4
    3. Domains for 7b95:
      1. 3084367Domain d7b95b_: 7b95 B: [420684]
        automated match to d6t7ja_
        complexed with bu3, fes, peg, sf3, sf4, tam
      2. 3084389Domain d7b95a_: 7b95 A: [420706]
        automated match to d6t7ja_
        complexed with bu3, fes, peg, sf3, sf4, tam
    4. Domains for 7b97:
      1. 3084330Domain d7b97b_: 7b97 B: [420647]
        automated match to d6t7ja_
        complexed with bu3, fes, h2s, sf4, t2n
      2. 3084436Domain d7b97a_: 7b97 A: [420753]
        automated match to d6t7ja_
        complexed with bu3, fes, h2s, sf4, t2n
    5. Domains for 7b9a:
      1. 3084348Domain d7b9ad_: 7b9a D: [420665]
        automated match to d6t7ja_
        complexed with br, fes, h2s, sf4, t2n, xe
      2. 3084368Domain d7b9aa_: 7b9a A: [420685]
        automated match to d6t7ja_
        complexed with br, fes, h2s, sf4, t2n, xe
      3. 3084454Domain d7b9ab_: 7b9a B: [420771]
        automated match to d6t7ja_
        complexed with br, fes, h2s, sf4, t2n, xe
      4. 3084467Domain d7b9ac_: 7b9a C: [420784]
        automated match to d6t7ja_
        complexed with br, fes, h2s, sf4, t2n, xe

More info for Protein automated matches from e.26.1.0: automated matches

Timeline for Protein automated matches from e.26.1.0: automated matches: