Lineage for d5xisf_ (5xis F:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (296 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 3048656Domain d5xisf_: 5xis F: [348718]
    automated match to d3dvgy_
    complexed with mg, xyz

Details for d5xisf_

PDB Entry: 5xis (more details), 1.78 Å

PDB Description: crystal structure of rnf168 udm1 in complex with lys63-linked diubiquitin, form i
PDB Compounds: (F:) Ubiquitin-40S ribosomal protein S27a

SCOPe Domain Sequences for d5xisf_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5xisf_ d.15.1.1 (F:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqrestlhlvlrlrgg

SCOPe Domain Coordinates for d5xisf_:

Click to download the PDB-style file with coordinates for d5xisf_.
(The format of our PDB-style files is described here.)

Timeline for d5xisf_:

  • d5xisf_ is new in SCOPe 2.07-stable