Lineage for d5y2ec1 (5y2e C:95-140)

  1. Root: SCOPe 2.07
  2. 2590057Class h: Coiled coil proteins [57942] (7 folds)
  3. 2590058Fold h.1: Parallel coiled-coil [57943] (41 superfamilies)
    this is not a true fold; includes oligomers of shorter identical helices
  4. 2590957Superfamily h.1.13: Rotavirus nonstructural proteins [58030] (2 families) (S)
    not a true superfamily
  5. 2590958Family h.1.13.1: NSP4 oligomerization domain [58031] (2 proteins)
  6. 2590965Protein automated matches [254616] (6 species)
    not a true protein
  7. 3048599Species Rotavirus a (strain rva/cow/united states/ncdv-lincoln/1969/g6p6[1]) [TaxId:36439] [348661] (1 PDB entry)
  8. 3048600Domain d5y2ec1: 5y2e C:95-140 [348662]
    Other proteins in same PDB: d5y2ea2, d5y2eb2, d5y2ec2, d5y2ed2
    automated match to d3miwc_

Details for d5y2ec1

PDB Entry: 5y2e (more details), 2.7 Å

PDB Description: crystal structure of the oligomerization domain of nsp4 from the rotavirus strain ncdv
PDB Compounds: (C:) Non-structural glycoprotein 4

SCOPe Domain Sequences for d5y2ec1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5y2ec1 h.1.13.1 (C:95-140) automated matches {Rotavirus a (strain rva/cow/united states/ncdv-lincoln/1969/g6p6[1]) [TaxId: 36439]}

SCOPe Domain Coordinates for d5y2ec1:

Click to download the PDB-style file with coordinates for d5y2ec1.
(The format of our PDB-style files is described here.)

Timeline for d5y2ec1:

  • d5y2ec1 appears in periodic updates to SCOPe 2.07 starting on 2018-04-07