Lineage for d5v03r_ (5v03 R:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2319424Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 2319425Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 2319893Family a.39.1.5: Calmodulin-like [47502] (24 proteins)
    Duplication: made with two pairs of EF-hands
  6. 2319950Protein Calmodulin [47516] (12 species)
  7. 2319951Species African clawed frog (Xenopus laevis) [TaxId:8355] [47521] (26 PDB entries)
  8. 3047855Domain d5v03r_: 5v03 R: [347917]
    Other proteins in same PDB: d5v03b1, d5v03b2, d5v03b3
    automated match to d1iq5a_
    complexed with 658, ca, so4

Details for d5v03r_

PDB Entry: 5v03 (more details), 1.58 Å

PDB Description: a positive allosteric modulator binding pocket in sk2 ion channels is shared by riluzole and cyppa
PDB Compounds: (R:) calmodulin

SCOPe Domain Sequences for d5v03r_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5v03r_ a.39.1.5 (R:) Calmodulin {African clawed frog (Xenopus laevis) [TaxId: 8355]}
qlteeqiaefkeafslfdkdgdgtittkelgtvmrslgqnpteaelqdminevdadgngt
idfpefltmmarkmkdtdseeeireafrvfdkdgngyisaaelrhvmtnlgekltdeevd
emireadidgdgqvnyeefvqmmta

SCOPe Domain Coordinates for d5v03r_:

Click to download the PDB-style file with coordinates for d5v03r_.
(The format of our PDB-style files is described here.)

Timeline for d5v03r_:

  • d5v03r_ appears in periodic updates to SCOPe 2.07 starting on 2018-04-06