SCOPe 2.08: Domain d5tc2b_: 5tc2 B:

Lineage for d5tc2b_ (5tc2 B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.7: DNA-binding domain of retroviral integrase [50122] (2 families)

5. Family b.34.7.1: DNA-binding domain of retroviral integrase [50123] (1 protein)
   Pfam PF00552, Pfam PF18103

6. Protein DNA-binding domain of retroviral integrase [50124] (4 species)

7. Species Human immunodeficiency virus type 1 [TaxId:11676] [50125] (8 PDB entries)

8. Domain d5tc2b_: 5tc2 B: [347682]
   automated match to d1c6vx_
   complexed with gol

Details for d5tc2b_

PDB Entry: 5tc2, 1.84 Å

PDB Description: c-terminal domain of hiv-1 integrase, crystal structure

PDB Compounds: (B:) integrase

SCOPe Domain Sequences for d5tc2b_:

Sequence; same for both SEQRES and ATOM records:

>d5tc2b_ b.34.7.1 (B:) DNA-binding domain of retroviral integrase {Human immunodeficiency virus type 1 [TaxId: 11676]}
kiqnfrvyyrdsrnslwkgpakllwkgegavviqdnsdikvvprrkakiirdygk

Timeline for d5tc2b_:

• d5tc2b_ first appeared in SCOPe 2.07