SCOPe 2.08: Domain d5nxyc_: 5nxy C:

Lineage for d5nxyc_ (5nxy C:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (161 species)
   not a true protein

7. Species Bacillus subtilis [TaxId:1423] [187940] (8 PDB entries)

8. Domain d5nxyc_: 5nxy C: [346965]
   automated match to d3r6ua_
   complexed with 1y8, edo

Details for d5nxyc_

PDB Entry: 5nxy, 1.9 Å

PDB Description: crystal structure of opuac from b. subtilis in complex with arsenobetaine

PDB Compounds: (C:) Osmotically activated L-carnitine/choline ABC transporter substrate-binding protein OpuCC

SCOPe Domain Sequences for d5nxyc_:

Sequence, based on SEQRES records:

>d5nxyc_ c.94.1.0 (C:) automated matches {Bacillus subtilis [TaxId: 1423]}
qtikigaqsmseseiiasmqgqliehhtdlktttiknlgsnavqqqalmngeidiaatry
tgdaltgtlrmepekdpdkalaltqrefkkrydlkwydsygfdntyaftvskeladqyhl
etvsdvkkwapqlklgvdnywmklkgngyqdftktygmtfggtypmqiglvydavksgkm
divlaystdgriksyglkmlkddkqffppydcspvvpekvlkehpelegiikkmlgkidt
atmqelnyevdgnlkepsvvakeylekhryfe

Sequence, based on observed residues (ATOM records):

>d5nxyc_ c.94.1.0 (C:) automated matches {Bacillus subtilis [TaxId: 1423]}
qtikigaqsmseseiiasmqgqliehhtdlktttiknlgqqalmngeidiaatrytgdal
tgtlrmepekdpdkalaltqrefkkrydlkwydsygfdntyaftvskeladqyhletvsd
vkkwapqlklgvdnywmklkgngyqdftktygmtfggtypmqiglvydavksgkmdivla
ystdgriksyglkmlkddkqffppydcspvvpekvlkehpelegiikkmlgkidtatmqe
lnyevdgnlkepsvvakeylekhryfe

Timeline for d5nxyc_:

• d5nxyc_ first appeared in SCOPe 2.07