Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2970038Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2970927Superfamily d.110.6: Sensory domain-like [103190] (5 families) (S)
    alpha(2)-beta(2)-alpha(2)-beta(3); possibly related to the PAS domain
  5. 2970986Family d.110.6.4: Histidine kinase family 1 (HK1) sensor domains [345974] (6 proteins)
    Pfam PF02743, contains double domain arrangement like LuxQ
  6. 2971024Protein automated matches [346106] (2 species)
    not a true protein

Species:

  1. 2971025Pseudomonas fluorescens [TaxId:205922] [382327] (7 PDB entries)
    1. Domain for 6pxy:
    2. Domains for 6py3:
      1. 2971027Domain d6py3a_: 6py3 A: [382328]
        Other proteins in same PDB: d6py3b2
        automated match to d5ltxa_
        complexed with ile
      2. 2971028Domain d6py3b1: 6py3 B:34-271 [382335]
        Other proteins in same PDB: d6py3b2
        automated match to d5ltxa_
        complexed with ile
    3. Domain for 6py4:
    4. Domain for 6py5:
    5. Domain for 6pyi:
    6. Domain for 6q0f:
    7. Domain for 6q0g:
  2. 2971034Vibrio cholerae [TaxId:666] [346381] (2 PDB entries)
    1. Domain for 5ave:
    2. Domains for 5avf:
      1. 2971036Domain d5avfa1: 5avf A:58-296 [345537]
        Other proteins in same PDB: d5avfa2, d5avfb2
        automated match to d3c8ca_
        complexed with tau
      2. 2971037Domain d5avfb1: 5avf B:58-296 [345539]
        Other proteins in same PDB: d5avfa2, d5avfb2
        automated match to d3c8ca_
        complexed with tau

More info for Protein automated matches from d.110.6.4: Histidine kinase family 1 (HK1) sensor domains

Timeline for Protein automated matches from d.110.6.4: Histidine kinase family 1 (HK1) sensor domains: