Lineage for d5diib1 (5dii B:6-114)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2955934Superfamily d.58.56: CcmK-like [143414] (2 families) (S)
    contains extra C-terminal helix; forms compact hexameric 'tiles' of hexagonal shape
  5. 2956023Family d.58.56.0: automated matches [195116] (1 protein)
    not a true family
  6. 2956024Protein automated matches [195117] (13 species)
    not a true protein
  7. 2956071Species Haliangium ochraceum [TaxId:502025] [279894] (3 PDB entries)
  8. 2956072Domain d5diib1: 5dii B:6-114 [345589]
    automated match to d3nwga1
    complexed with sf4

Details for d5diib1

PDB Entry: 5dii (more details), 1.8 Å

PDB Description: structure of an engineered bacterial microcompartment shell protein binding a [4fe-4s] cluster
PDB Compounds: (B:) Microcompartments protein

SCOPe Domain Sequences for d5diib1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5diib1 d.58.56.0 (B:6-114) automated matches {Haliangium ochraceum [TaxId: 502025]}
erfdatppagepdrpalgvleltsiargitvadaalkrapslllmsrpvcsgkhllmmrg
qvaeveesmiaareiagagsgalldelelpyaheqlwrfldapvvadaw

SCOPe Domain Coordinates for d5diib1:

Click to download the PDB-style file with coordinates for d5diib1.
(The format of our PDB-style files is described here.)

Timeline for d5diib1: