SCOPe 2.07: Domain d4py2a1: 4py2 A:3-352

Lineage for d4py2a1 (4py2 A:3-352)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)

5. Family c.26.1.0: automated matches [191377] (1 protein)
   not a true family

6. Protein automated matches [190459] (59 species)
   not a true protein

7. Species Brucella melitensis [TaxId:359391] [346283] (2 PDB entries)

8. Domain d4py2a1: 4py2 A:3-352 [345412]
   Other proteins in same PDB: d4py2a2, d4py2b2, d4py2c2
   automated match to d2x1la1
   protein/RNA complex; complexed with 43e, edo

Details for d4py2a1

PDB Entry: 4py2, 2.15 Å

PDB Description: crystal structure of methionyl-trna synthetase metrs from brucella melitensis in complex with inhibitor 1-{3-[(3,5-dichlorobenzyl) amino]propyl}-3-thiophen-3-ylurea

PDB Compounds: (A:) Methionine--tRNA ligase

SCOPe Domain Sequences for d4py2a1:

Sequence, based on SEQRES records:

>d4py2a1 c.26.1.0 (A:3-352) automated matches {Brucella melitensis [TaxId: 359391]}
rekyyittaiaypngkphighayeliatdamarfqrlngmdvyfltgtdehgikmlqsar
kegitprdladrntsafrrmaevlnssnddyirtseerhykasqaiwqamvangdiykgg
yagwysvrdeayygeeetevradgvrygpqgtpvewveeesyffrlsayqdklldlyenn
pgfimpaerrneivsfvksglkdlsisrttfdwgipvpgdekhvmyvwvdaltnyitalg
ypdttderwaywpanahiigkdisrfhavywpaflmsaqlplpkrvfahgflfnrgekms
ksvgnvidpfelverygldqlryflmrevpfgqdgsysheaivnrtnadl

Sequence, based on observed residues (ATOM records):

>d4py2a1 c.26.1.0 (A:3-352) automated matches {Brucella melitensis [TaxId: 359391]}
rekyyittaiaypngkphighayeliatdamarfqrlngmdvyfltgtdehgikmlqsar
kegitprdladrntsafrrmaevlnssnddyirtseerhykasqaiwqamvangdiykgg
yagwysvrdeayygeeetevradgvrygpqgtpvewveeesyffrlsayqdklldlyenn
pgfimpaerrneivsfvksglkdlsisrttfdwgipvpgdekhvmyvwvdaltnyitalg
ypdttderwaywpanahiigkdisrfhavywpaflmsaqlplpkrvfahgflfnridpfe
lverygldqlryflmrevpfgqdgsysheaivnrtnadl

Timeline for d4py2a1:

• d4py2a1 is new in SCOPe 2.07-stable
  
• d4py2a1 appears in the current release, SCOPe 2.08