Class d: Alpha and beta proteins (a+b) [53931] (388 folds) |
Fold d.394: N-terminal domain of Prp8 / Spp42 [345891] (1 superfamily) Central core mainly helical with several small beta sheets; also includes Cwf17-binding helix and Cwf10-binding lasso region |
Superfamily d.394.1: N-terminal domain of Prp8 / Spp42 [345924] (1 family) Pfam PF08082, Pfam PF08083 |
Family d.394.1.1: N-terminal domain of Prp8 / Spp42 [345979] (1 protein) |
Protein Pre-mRNA splicing factor 8, Prp8 / Spp42 [346113] (1 species) |
Species Schizosaccharomyces pombe 972h- [TaxId:284812] [346403] (1 PDB entry) |
Domain d3jb9a5: 3jb9 A:47-697 [344796] Other proteins in same PDB: d3jb9a1, d3jb9a2, d3jb9a3, d3jb9a4, d3jb9b1, d3jb9b2, d3jb9b3, d3jb9b4, d3jb9b5, d3jb9c_, d3jb9e_, d3jb9f_, d3jb9g_, d3jb9h_, d3jb9i_, d3jb9j_, d3jb9k_, d3jb9l_, d3jb9m_, d3jb9r_, d3jb9s1, d3jb9s2, d3jb9t1, d3jb9t2, d3jb9u1, d3jb9u2, d3jb9u3, d3jb9v1, d3jb9v2, d3jb9w_, d3jb9x1, d3jb9x2, d3jb9x3, d3jb9x4, d3jb9y1, d3jb9y2, d3jb9z_ protein/RNA complex; complexed with adp, gdp, mg, zn |
PDB Entry: 3jb9 (more details), 3.6 Å
SCOPe Domain Sequences for d3jb9a5:
Sequence, based on SEQRES records: (download)
>d3jb9a5 d.394.1.1 (A:47-697) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Schizosaccharomyces pombe 972h- [TaxId: 284812]} lekqlnerarkwrasqkskfgvkrkqgyvqtekadlppehlrkimkdrgdmssrkfradk rsylgalkylphavlkllenmpmpweeyrevkvlyhvtgaitfvnesprviephfiaqwg tmwmmmrrekrdrknfkrlrfppfddeeppfsidqlldlepleairmdldeeddapvmdw fyenkaledtphvngptyrrwklnlpqmanlhrlgyqllsdlrddnyfylfndnsfftak alnvaipggpkfeplykdeapemedwnefndiykliirhpikteyriafpylynsrarsv alseyhqpsnvfvppedpdlpaffwdpiinpitsrqltlheldtspedsaieedpnfeip fdpffhsediefehtasalillwaphpfnkrsgatkraqdvplikhwylehcppnqpvkv rvsyqkllkshvmnklhmahpkshtnrsllrqlkntkffqstsidwveaglqvcrqgynm lqllihrkgltylhldyncnlkptktlttkerkksrfgnafhlmreilrltklivdshvq yrlgnidayqladglhyifnhvgqltgmyrykyrlmrqirackdfkhliyyrfntgpvgk gpgcgfwapswrvwlfflrgivpllerwlgnllarqfegrhstgvakqitk
>d3jb9a5 d.394.1.1 (A:47-697) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Schizosaccharomyces pombe 972h- [TaxId: 284812]} lekqlnerarkwrasqkskfgvkrkqgyvqtekadlppehlrkimkdrgdmssrkfradk rsylgalkylphavlkllenmpmpweeyrevkvlyhvtgaitfvnesprviephfiaqwg tmwmmmrrekrdrknfkrlrfppfddeeppfsidqlldlepleairmdldeeddapvmdw fyenkaledtphvngptyrrwklnlpqmanlhrlgyqllsdlrddnyfylfndnsfftak alnvaipggpkfeplyefndiykliirhpikteyriafpylynsrarsvalseyhqpsnv fvppedpdlpaffwdpiinpitsrqltlheldtspedsaieedpnfeipfdpffhsedie fehtasalillwaphpfnkrsgatkraqdvplikhwylehcppnqpvkvrvsyqkllksh vmnklhmahpkshtnrsllrqlkntkffqstsidwveaglqvcrqgynmlqllihrkglt ylhldyncnlkptktlttkerkksrfgnafhlmreilrltklivdshvqyrlgnidayql adglhyifnhvgqltgmyrykyrlmrqirackdfkhliyyrfntgpvgkgpgcgfwapsw rvwlfflrgivpllerwlgnllarqfegrhstgvakqitk
Timeline for d3jb9a5:
View in 3D Domains from same chain: (mouse over for more information) d3jb9a1, d3jb9a2, d3jb9a3, d3jb9a4 |
View in 3D Domains from other chains: (mouse over for more information) d3jb9b1, d3jb9b2, d3jb9b3, d3jb9b4, d3jb9b5, d3jb9c_, d3jb9e_, d3jb9f_, d3jb9g_, d3jb9h_, d3jb9i_, d3jb9j_, d3jb9k_, d3jb9l_, d3jb9m_, d3jb9r_, d3jb9s1, d3jb9s2, d3jb9t1, d3jb9t2, d3jb9u1, d3jb9u2, d3jb9u3, d3jb9v1, d3jb9v2, d3jb9w_, d3jb9x1, d3jb9x2, d3jb9x3, d3jb9x4, d3jb9y1, d3jb9y2, d3jb9z_ |