Lineage for d4qv4d_ (4qv4 D:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2548740Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2548741Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2548925Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2549037Protein Proteasome alpha subunit (non-catalytic) [56255] (9 species)
    contains an extension to the common fold at the N-terminus
  7. 2549053Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56257] (235 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 2549382Domain d4qv4d_: 4qv4 D: [344034]
    Other proteins in same PDB: d4qv4a_, d4qv4b_, d4qv4c_, d4qv4f_, d4qv4h_, d4qv4i_, d4qv4j_, d4qv4l_, d4qv4m_, d4qv4n_, d4qv4o_, d4qv4p_, d4qv4q_, d4qv4t_, d4qv4v_, d4qv4w_, d4qv4x_, d4qv4z_
    automated match to d4cr2e_
    complexed with cl, mg; mutant

Details for d4qv4d_

PDB Entry: 4qv4 (more details), 2.7 Å

PDB Description: yCP beta5-M45T mutant
PDB Compounds: (D:) Proteasome subunit alpha type-5

SCOPe Domain Sequences for d4qv4d_:

Sequence, based on SEQRES records: (download)

>d4qv4d_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgegas
geerlmsrpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewh
ssltlkeaellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekea
ae

Sequence, based on observed residues (ATOM records): (download)

>d4qv4d_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgelms
rpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewhssltlke
aellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekeaae

SCOPe Domain Coordinates for d4qv4d_:

Click to download the PDB-style file with coordinates for d4qv4d_.
(The format of our PDB-style files is described here.)

Timeline for d4qv4d_:

  • d4qv4d_ is new in SCOPe 2.07-stable