Lineage for d5vfmb1 (5vfm B:3-133)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2338840Fold a.133: Phospholipase A2, PLA2 [48618] (1 superfamily)
    common core: 2 helices, disulfide-linked, and a calcium-binding loop
  4. 2338841Superfamily a.133.1: Phospholipase A2, PLA2 [48619] (4 families) (S)
  5. 2338846Family a.133.1.2: Vertebrate phospholipase A2 [48623] (3 protein domains)
    automatically mapped to Pfam PF00068
  6. 2338958Protein Snake phospholipase A2 [48624] (38 species)
  7. 2338992Species Bothrops pauloensis [TaxId:1042543] [343230] (4 PDB entries)
  8. 2338994Domain d5vfmb1: 5vfm B:3-133 [343247]
    Other proteins in same PDB: d5vfma2, d5vfmb2
    automated match to d1pa0a_
    complexed with hc4, me2, so4

Details for d5vfmb1

PDB Entry: 5vfm (more details), 2.06 Å

PDB Description: crystal structure of bnsp-7 from bothrops pauloensis complexed with p- coumaric acid
PDB Compounds: (B:) Basic phospholipase A2 homolog BnSP-7

SCOPe Domain Sequences for d5vfmb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vfmb1 a.133.1.2 (B:3-133) Snake phospholipase A2 {Bothrops pauloensis [TaxId: 1042543]}
felgkmilqetgknpaksygaygcncgvlgrgqpkdatdrccyvhkccykkltgcdpkkd
rysyswkdktivcgennpclkelcecdkavaiclrenlgtynkkyryhlkpfckkadpc

SCOPe Domain Coordinates for d5vfmb1:

Click to download the PDB-style file with coordinates for d5vfmb1.
(The format of our PDB-style files is described here.)

Timeline for d5vfmb1:

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Domains from same chain:
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d5vfmb2