Lineage for d5vagb2 (5vag B:107-213)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2017116Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2020524Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 protein domains)
  6. 2024392Protein automated matches [190374] (16 species)
    not a true protein
  7. 2024406Species Human (Homo sapiens) [TaxId:9606] [187221] (698 PDB entries)
  8. 2299908Domain d5vagb2: 5vag B:107-213 [343209]
    Other proteins in same PDB: d5vagb1
    automated match to d1dn0a2
    complexed with edo

Details for d5vagb2

PDB Entry: 5vag (more details), 1.9 Å

PDB Description: crystal structure of h7-specific antibody m826 in complex with the ha1 domain of hemagglutinin from h7n9 influenza virus
PDB Compounds: (B:) Light chain of antibody m826

SCOPe Domain Sequences for d5vagb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vagb2 b.1.1.2 (B:107-213) automated matches {Human (Homo sapiens) [TaxId: 9606]}
krtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteq
dskdstyslsstltlskadyekhkvyacevthqglsspvtksfnrge

SCOPe Domain Coordinates for d5vagb2:

Click to download the PDB-style file with coordinates for d5vagb2.
(The format of our PDB-style files is described here.)

Timeline for d5vagb2:

  • d5vagb2 appears in periodic updates to SCOPe 2.06 starting on 2017-12-21