Lineage for Species: Agrobacterium tumefaciens [TaxId: 1183423]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2145531Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2145532Protein automated matches [190039] (140 species)
    not a true protein
  7. 2299843Species Agrobacterium tumefaciens [TaxId:1183423] [343144] (1 PDB entry)

PDB entry in Species: Agrobacterium tumefaciens [TaxId: 1183423]:

  • Domain(s) for 5org:
    1. 2299844Domain d5orgb_: 5org B: [343145]
      automated match to d4pp0b_
      protein/DNA complex; complexed with 6db, act, cl, edo, gol, na
    2. 2299872Domain d5orga_: 5org A: [343173]
      automated match to d4pp0b_
      protein/DNA complex; complexed with 6db, act, cl, edo, gol, na

More info for Species Agrobacterium tumefaciens [TaxId:1183423] from c.94.1.0 automated matches

Timeline for Species Agrobacterium tumefaciens [TaxId:1183423] from c.94.1.0 automated matches:

  • Species Agrobacterium tumefaciens [TaxId:1183423] from c.94.1.0 automated matches appears in periodic updates to SCOPe 2.06 starting on 2017-12-21